Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903036.1_cds_XP_016453013.1_47184
CDS Infomation

[gene=LOC107777493] [db_xref=GeneID:107777493] [protein=probable protein phosphatase 2C 40] [protein_id=XP_016453013.1] [location=join(19399..20511,20766..21030,21598..21725)] [gbkey=CDS]
Sequence

ATGATGGGTGGACAAGCAATAACTGATCCAGGAGCGGAAATCAAAATAAGTTTTGGATAT
CACTGTAATTCCAACACCGATGATTCTGGCGACGAATCAGATGGTATTGACATGCGTCCT
GGAACTAAACTTCGAAGAGCCAACAGTTCCTTCTCTTGCCTTTCTGGTGCTGCTCTAAGT
GCCAATGCCACTCTAGCTAACACAAATATTTGCAATGGATTGTTTGGGGCTGAGATACTG
CCCGCACTGGATTCACCTACTTCATTCCGCCGGATACCCTCTTCTCCATCCTTTTCAAAG
TTGGATTTATTGTCATCTTCTTTTCAGAGTAGTTTGTCAAACTTAAGTTGTAGTCCGTCC
TCTCCGAGTGAGCTAGCTGAAGACAATTCATCTTCATTGAAGTCGATAAGTGCTCCTTCT
TGGAGTGAAAGCTTCCTTAATGCAACAGAAGTTCAAATAGCGGGTGGTGCAGCGGGTGAA
GACAGAGTACAGGCTGTCTGTTCAGAAGAGAACGACTCACTTTTCTGTGCCATATATGAT
GGATTTAATGGAAGAGATGCAGCTGACTTTCTGGCTGGAACATTGTATGAAACAATTAGA
CATTACCTTAGTTTATTGAATTGGGAACTTGAACGAGAGTCTAAAGTTAATAAGGGCTCA
TATGTTGATTGCTTCGCTAATGGCCTTCCTTATTTAGAGGCAGAAAAGTCGTGTAGCTCT
TTTAAGCAAAAGGTACTTAATAGCCTGGAACAGGCTCTTACTCAAGCTGAGAACGATTTC
CTTCACATGGTTGAACAGGAAATGGATGACCGTCCTGACTTAGTATCGATTGGATCCTGT
GTATTAGTTGTGCTTCTACTCGGGAAGAACTTGTATGTGCTAAATGCAGGAGATAGTCGA
GCTGTATTGGCAACTTATGGTGAAGCCATCGTTACTAATAGTGATGGACGATTGCAAGCT
GTGCAGCTTACAGTTAGTCATACTGTCGATAATGAATCTGAAAGAATCCAACTATTAAAG
AATCATCCTGAAGATCACTCCACGATCGTGGGTGGGAAAGTCAAGGGAAAGCTAAAGGTT
ACTCGGGCACTTGGAGTTGGTTACTTGAAAAAGAAGAGTATGAATGATGCTTTGATGGGA
ATTCTTCGCGTCCGAAATCTAATCAGCCCTCCATATATTTCTGTACAACCGTCTCTTACT
GTACATGAAATATCAAGTTCTGATCACTTCGTTGTACTTGGAAGCGACGGTCTATTTGAC
TTCTTCAACAATGATGAGGTTGTAAAGCTTGTCCATTCTTATATTCAACGTTACCCTTTA
GGTGATCCAGCCAAATTTCTGCTGGAGCAGCTTGTAATTCGAGCAGCAGATTGTGCAGGC
TTTAGTAAGGAAGAGTTGATGAGCATACCAGCTGGGAGGAGGAGGAAATATCACGACGAT
GTGACAGTAATTGTGATAATTCTTGGAATGAACAAACGCACCTCAAAAGCATCGACTCGC
CTATGA

Peptide Sequence

PEP ID

XP_016453013.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 40 [Nicotiana tabacum]
Sequence

MMGGQAITDPGAEIKISFGYHCNSNTDDSGDESDGIDMRPGTKLRRANSSFSCLSGAALS
ANATLANTNICNGLFGAEILPALDSPTSFRRIPSSPSFSKLDLLSSSFQSSLSNLSCSPS
SPSELAEDNSSSLKSISAPSWSESFLNATEVQIAGGAAGEDRVQAVCSEENDSLFCAIYD
GFNGRDAADFLAGTLYETIRHYLSLLNWELERESKVNKGSYVDCFANGLPYLEAEKSCSS
FKQKVLNSLEQALTQAENDFLHMVEQEMDDRPDLVSIGSCVLVVLLLGKNLYVLNAGDSR
AVLATYGEAIVTNSDGRLQAVQLTVSHTVDNESERIQLLKNHPEDHSTIVGGKVKGKLKV
TRALGVGYLKKKSMNDALMGILRVRNLISPPYISVQPSLTVHEISSSDHFVVLGSDGLFD
FFNNDEVVKLVHSYIQRYPLGDPAKFLLEQLVIRAADCAGFSKEELMSIPAGRRRKYHDD
VTVIVIILGMNKRTSKASTRL

Transcript Sequence

Gene sequence data has not been registered.